8JCC

Human histone H2B variant H2BFWT Cryo-EM structure with 601 DNA sequence


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.42 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

Human histone H2B variant H2BFWT Cryo-EM structure with 601 DNA sequence

Ding, D.B.Ishibashi, T.

To be published.

Macromolecules

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Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Histone H3.1
A, E
135Homo sapiensMutation(s): 0 
Gene Names: 
UniProt & NIH Common Fund Data Resources
Find proteins for P68431 (Homo sapiens)
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PHAROS:  P68431
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UniProt GroupP68431
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Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
Histone H4
B, F
102Homo sapiensMutation(s): 0 
Gene Names: 
UniProt & NIH Common Fund Data Resources
Find proteins for P62805 (Homo sapiens)
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PHAROS:  P62805
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UniProt GroupP62805
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Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
Histone H2A type 1-B/E
C, G
129Homo sapiensMutation(s): 0 
Gene Names: H2AC4H2AFMHIST1H2ABH2AC8H2AFAHIST1H2AE
UniProt & NIH Common Fund Data Resources
Find proteins for P04908 (Homo sapiens)
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PHAROS:  P04908
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UniProt GroupP04908
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Entity ID: 4
MoleculeChains Sequence LengthOrganismDetailsImage
Histone H2B type W-T
D, H
152Homo sapiensMutation(s): 0 
Gene Names: H2BW1H2BFWT
UniProt & NIH Common Fund Data Resources
Find proteins for Q7Z2G1 (Homo sapiens)
Explore Q7Z2G1 
Go to UniProtKB:  Q7Z2G1
GTEx:  ENSG00000123569 
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UniProt GroupQ7Z2G1
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Entity ID: 5
MoleculeChains LengthOrganismImage
DNA (147-MER)147synthetic construct
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Entity ID: 6
MoleculeChains LengthOrganismImage
DNA (147-MER)147synthetic construct
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.42 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

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Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Science Foundation (NSF, China)China32170548
The University Grants Committee, Research Grants Council (RGC)Hong KongC7009-20G

Revision History  (Full details and data files)

  • Version 1.0: 2024-05-15
    Type: Initial release